Description |
This workflow reads a list of pdb files, creates new directories using thepdb file names and copies the pdb files to corresponding new directories. |
Required Software |
Kepler 2.4 or above |
Overview |
None |
Usage |
There are two ways to run this workflow. One is through the graphic interface. After the workflowis opened, users can double-click the parameters to change their values and press the play button tostart. Another way is to run Kepler via a command line. |
Parameters |
d directory where the pdb files are located and where the new directories will be created. p pattern that the workflow will use to identify all the pdb files.Default is .*pdb$$. It can also be changed to .*mae$$ or .*sdf$$when .mae extension or .sdf extension are provided instead of .pdb extension. p2 pattern that will be replaced by an empty string. As a result, only the names of the pdbfiles are retained for creating directories. Default is .pdb. It can be changedto .*mae$$ or .*sdf$$ when .mae extension or .sdf extension are provided instead of .pdb extension. |